Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL512361.1-201ENST00000554200 418 ntBASIC16.86■□□□□ 0.29
SIX5Q8N196 AP005482.1-201ENST00000563722 1273 ntBASIC16.86■□□□□ 0.29
SIX5Q8N196 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.86■□□□□ 0.29
SIX5Q8N196 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 AC133552.6-201ENST00000613406 534 ntBASIC16.86■□□□□ 0.29
SIX5Q8N196 COX11-210ENST00000639671 696 ntBASIC16.86■□□□□ 0.29
SIX5Q8N196 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SIX5Q8N196 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SIX5Q8N196 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SIX5Q8N196 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.86■□□□□ 0.29
SIX5Q8N196 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SIX5Q8N196 AL021920.2-201ENST00000624828 1351 ntBASIC16.86■□□□□ 0.29
SIX5Q8N196 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 KRT8P49-201ENST00000604166 1432 ntBASIC16.86■□□□□ 0.29
SIX5Q8N196 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SIX5Q8N196 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SIX5Q8N196 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SIX5Q8N196 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.85■□□□□ 0.29
SIX5Q8N196 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 AC009053.2-201ENST00000563701 2365 ntBASIC16.85■□□□□ 0.29
SIX5Q8N196 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SIX5Q8N196 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
SIX5Q8N196 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.85■□□□□ 0.29
SIX5Q8N196 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX5Q8N196 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SIX5Q8N196 TMEM14DP-201ENST00000422205 345 ntBASIC16.85■□□□□ 0.29
SIX5Q8N196 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX5Q8N196 KRT223P-202ENST00000449164 1292 ntBASIC16.85■□□□□ 0.29
SIX5Q8N196 AC119751.2-201ENST00000504529 210 ntBASIC16.85■□□□□ 0.29
SIX5Q8N196 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.85■□□□□ 0.29
SIX5Q8N196 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX5Q8N196 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.85■□□□□ 0.29
SIX5Q8N196 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SIX5Q8N196 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX5Q8N196 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.85■□□□□ 0.29
SIX5Q8N196 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX5Q8N196 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SIX5Q8N196 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.85■□□□□ 0.29
SIX5Q8N196 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SIX5Q8N196 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.85■□□□□ 0.29
SIX5Q8N196 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SIX5Q8N196 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SIX5Q8N196 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SIX5Q8N196 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SIX5Q8N196 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SIX5Q8N196 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SIX5Q8N196 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.84■□□□□ 0.29
SIX5Q8N196 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.84■□□□□ 0.29
SIX5Q8N196 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SIX5Q8N196 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms