Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.33■□□□□ 0.37
SCUBE3Q8IX30 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCUBE3Q8IX30 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
SCUBE3Q8IX30 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCUBE3Q8IX30 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 AC105339.1-204ENST00000636249 355 ntBASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 AC134684.3-201ENST00000641758 218 ntBASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCUBE3Q8IX30 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 CROCCP1-201ENST00000426910 5675 ntBASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 AC006449.5-201ENST00000610658 2098 ntBASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCUBE3Q8IX30 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 SPCS2P4-201ENST00000436160 681 ntBASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 RN7SL589P-201ENST00000481268 310 ntBASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms