Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 LINC00982-205ENST00000420957 435 ntBASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 BX276092.5-203ENST00000456199 560 ntBASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 TP73-AS1-210ENST00000637775 1455 ntBASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 LINC01144-201ENST00000626198 1710 ntBASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 KRT8P39-201ENST00000396270 1433 ntBASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM42Q8IWZ5 TOP3BP1-201ENST00000420768 1380 ntBASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 AC148477.5-201ENST00000625164 1645 ntBASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 AL121672.3-201ENST00000608644 468 ntBASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 AL512652.2-201ENST00000625156 1716 ntBASIC16.52■□□□□ 0.24
TRIM42Q8IWZ5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 AC006058.4-201ENST00000624016 1670 ntBASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 AL031731.1-201ENST00000642131 2094 ntBASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM42Q8IWZ5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 SNX33P1-201ENST00000592116 1762 ntBASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM42Q8IWZ5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms