Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 AC116562.2-201ENST00000507042 360 ntBASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 AC113410.3-201ENST00000623366 203 ntBASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 AC139749.1-202ENST00000617529 3139 ntBASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.84□□□□□ -0.35
KCNIP4Q6PIL6 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP4Q6PIL6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 AP003071.4-201ENST00000562276 1284 ntBASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 C2orf69P3-201ENST00000565542 1120 ntBASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 AC010240.3-201ENST00000607688 395 ntBASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP4Q6PIL6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 LINC01101-201ENST00000622953 1884 ntBASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms