Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 AC007967.2-201ENST00000432613 625 ntBASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 MIR3909-201ENST00000579518 119 ntBASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 AC021097.1-201ENST00000607902 574 ntBASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 AC064836.3-201ENST00000607928 673 ntBASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF549Q6P9A3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 PMS2P4-201ENST00000412466 1052 ntBASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 SLC25A1P1-201ENST00000528351 927 ntBASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF549Q6P9A3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 NFIC-211ENST00000641145 8399 ntBASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 AC023141.13-201ENST00000604991 943 ntBASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 AC004877.2-201ENST00000623941 599 ntBASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 AC025580.3-201ENST00000617932 1424 ntBASIC16.36■□□□□ 0.21
ZNF549Q6P9A3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms