Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 MIR346-201ENST00000362234 95 ntBASIC17.1■□□□□ 0.33
TRNP1Q6NT89 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 AP000842.3-202ENST00000569238 1080 ntBASIC17.1■□□□□ 0.33
TRNP1Q6NT89 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 AL513210.1-201ENST00000629608 234 ntBASIC17.1■□□□□ 0.33
TRNP1Q6NT89 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 AL603832.2-201ENST00000566195 2125 ntBASIC17.09■□□□□ 0.33
TRNP1Q6NT89 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 AC004461.1-201ENST00000412461 403 ntBASIC17.09■□□□□ 0.33
TRNP1Q6NT89 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 RN7SL589P-201ENST00000481268 310 ntBASIC17.09■□□□□ 0.33
TRNP1Q6NT89 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 AC023511.2-201ENST00000618803 211 ntBASIC17.09■□□□□ 0.33
TRNP1Q6NT89 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRNP1Q6NT89 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRNP1Q6NT89 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.08■□□□□ 0.33
TRNP1Q6NT89 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRNP1Q6NT89 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRNP1Q6NT89 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
TRNP1Q6NT89 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRNP1Q6NT89 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
TRNP1Q6NT89 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
TRNP1Q6NT89 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 AC105233.2-201ENST00000523697 349 ntBASIC17.08■□□□□ 0.32
TRNP1Q6NT89 AF228730.5-201ENST00000530288 346 ntBASIC17.08■□□□□ 0.32
TRNP1Q6NT89 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.08■□□□□ 0.32
TRNP1Q6NT89 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms