Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 AC126755.1-201ENST00000525846 6405 ntBASIC15.6■□□□□ 0.09
LPCAT4Q643R3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.6■□□□□ 0.09
LPCAT4Q643R3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 TSPY7P-201ENST00000431358 1114 ntBASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 RASA4DP-201ENST00000460726 1199 ntBASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.59■□□□□ 0.09
LPCAT4Q643R3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
LPCAT4Q643R3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.58■□□□□ 0.09
LPCAT4Q643R3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.58■□□□□ 0.09
LPCAT4Q643R3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LPCAT4Q643R3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LPCAT4Q643R3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LPCAT4Q643R3 LINC00552-201ENST00000625151 2579 ntBASIC15.58■□□□□ 0.09
LPCAT4Q643R3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.58■□□□□ 0.08
LPCAT4Q643R3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 AC091951.1-201ENST00000512854 2465 ntBASIC15.58■□□□□ 0.08
LPCAT4Q643R3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LPCAT4Q643R3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms