Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 AC092865.5-201ENST00000545435 363 ntBASIC17.11■□□□□ 0.33
RAB6CQ53S08 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB6CQ53S08 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 AC010491.1-201ENST00000563101 2797 ntBASIC17.11■□□□□ 0.33
RAB6CQ53S08 AC132872.4-202ENST00000622924 2756 ntBASIC17.11■□□□□ 0.33
RAB6CQ53S08 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB6CQ53S08 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 CEND1P1-201ENST00000451006 455 ntBASIC17.1■□□□□ 0.33
RAB6CQ53S08 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 POU5F1P6-201ENST00000466990 990 ntBASIC17.1■□□□□ 0.33
RAB6CQ53S08 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB6CQ53S08 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB6CQ53S08 ELL2P1-201ENST00000413990 1906 ntBASIC17.09■□□□□ 0.33
RAB6CQ53S08 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 AC024909.3-201ENST00000611513 2257 ntBASIC17.09■□□□□ 0.33
RAB6CQ53S08 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 SPCS2P4-201ENST00000436160 681 ntBASIC17.09■□□□□ 0.33
RAB6CQ53S08 TIMM8BP1-201ENST00000452384 211 ntBASIC17.09■□□□□ 0.33
RAB6CQ53S08 AC079140.1-201ENST00000508039 487 ntBASIC17.09■□□□□ 0.33
RAB6CQ53S08 YBX1P5-201ENST00000509441 847 ntBASIC17.09■□□□□ 0.33
RAB6CQ53S08 LINC01225-203ENST00000563550 1244 ntBASIC17.09■□□□□ 0.33
RAB6CQ53S08 AC005829.1-201ENST00000570002 483 ntBASIC17.09■□□□□ 0.33
RAB6CQ53S08 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAB6CQ53S08 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB6CQ53S08 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB6CQ53S08 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB6CQ53S08 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB6CQ53S08 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB6CQ53S08 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB6CQ53S08 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB6CQ53S08 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB6CQ53S08 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB6CQ53S08 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.08■□□□□ 0.33
RAB6CQ53S08 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB6CQ53S08 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB6CQ53S08 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms