Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 TERC-201ENST00000602385 541 ntBASIC14.82□□□□□ -0.04
CCDC58Q4VC31 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC58Q4VC31 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 AL603832.2-201ENST00000566195 2125 ntBASIC14.81□□□□□ -0.04
CCDC58Q4VC31 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 AC026748.1-201ENST00000624349 3251 ntBASIC14.81□□□□□ -0.04
CCDC58Q4VC31 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 GGT4P-201ENST00000623672 1708 ntBASIC14.81□□□□□ -0.04
CCDC58Q4VC31 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 LINC00982-205ENST00000420957 435 ntBASIC14.81□□□□□ -0.04
CCDC58Q4VC31 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 CHCHD2P8-201ENST00000429873 447 ntBASIC14.81□□□□□ -0.04
CCDC58Q4VC31 KRT18P57-201ENST00000443599 1254 ntBASIC14.81□□□□□ -0.04
CCDC58Q4VC31 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC58Q4VC31 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms