Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 IER3-202ENST00000376377 1350 ntBASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 PCED1CP-201ENST00000419887 785 ntBASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 AC016027.1-202ENST00000607927 1699 ntBASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 FAM45BP-202ENST00000592932 1624 ntBASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ANKRD55Q3KP44 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 AL645929.1-201ENST00000420084 975 ntBASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 AC011840.4-201ENST00000578471 627 ntBASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 HYMAI.1-201ENST00000620949 238 ntBASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.74□□□□□ -0.21
ANKRD55Q3KP44 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ANKRD55Q3KP44 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms