Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 AC073621.1-201ENST00000392730 636 ntBASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 AC145285.3-201ENST00000564603 959 ntBASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF3Q3KNV8 AP002414.3-201ENST00000589352 1468 ntBASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 AC106730.1-201ENST00000566722 1090 ntBASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 AL353135.1-201ENST00000606729 504 ntBASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 Z83851.2-201ENST00000609564 659 ntBASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 AF228730.7-201ENST00000641842 219 ntBASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 HLA-A-202ENST00000376806 1854 ntBASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF3Q3KNV8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 AL135999.2-201ENST00000622438 1686 ntBASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 ELK2BP-201ENST00000415014 1224 ntBASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 AL591424.1-201ENST00000442569 1213 ntBASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 RNA5SP415-201ENST00000517246 115 ntBASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 KRT18P58-201ENST00000527480 1120 ntBASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 GGTLC5P-201ENST00000617623 998 ntBASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 AC117500.6-201ENST00000624871 588 ntBASIC14.68□□□□□ -0.06
PCGF3Q3KNV8 AL805961.1-202ENST00000641562 540 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms