Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH1Q08174 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH1Q08174 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PCDH1Q08174 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
PCDH1Q08174 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDH1Q08174 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH1Q08174 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH1Q08174 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDH1Q08174 AC006449.6-201ENST00000612330 2296 ntBASIC15.92■□□□□ 0.14
PCDH1Q08174 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDH1Q08174 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH1Q08174 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDH1Q08174 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 KRT19P2-202ENST00000557173 1012 ntBASIC15.92■□□□□ 0.14
PCDH1Q08174 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDH1Q08174 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH1Q08174 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 AC004877.2-201ENST00000623941 599 ntBASIC15.92■□□□□ 0.14
PCDH1Q08174 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 AL592424.1-201ENST00000563624 1536 ntBASIC15.92■□□□□ 0.14
PCDH1Q08174 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH1Q08174 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDH1Q08174 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PCDH1Q08174 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH1Q08174 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH1Q08174 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH1Q08174 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 AL596087.1-201ENST00000400979 1969 ntBASIC15.91■□□□□ 0.14
PCDH1Q08174 CICP6-201ENST00000457191 2729 ntBASIC15.91■□□□□ 0.14
PCDH1Q08174 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDH1Q08174 AL591424.1-201ENST00000442569 1213 ntBASIC15.91■□□□□ 0.14
PCDH1Q08174 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH1Q08174 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH1Q08174 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH1Q08174 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
PCDH1Q08174 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH1Q08174 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDH1Q08174 AC106730.1-201ENST00000566722 1090 ntBASIC15.91■□□□□ 0.14
PCDH1Q08174 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH1Q08174 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDH1Q08174 MST1L-201ENST00000442552 2185 ntBASIC15.91■□□□□ 0.14
PCDH1Q08174 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDH1Q08174 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDH1Q08174 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PCDH1Q08174 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
PCDH1Q08174 AC025580.3-201ENST00000617932 1424 ntBASIC15.91■□□□□ 0.14
PCDH1Q08174 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDH1Q08174 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH1Q08174 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDH1Q08174 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH1Q08174 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH1Q08174 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDH1Q08174 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDH1Q08174 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms