Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.62■□□□□ 0.09
GABREP78334 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.62■□□□□ 0.09
GABREP78334 AL512361.1-201ENST00000554200 418 ntBASIC15.62■□□□□ 0.09
GABREP78334 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.62■□□□□ 0.09
GABREP78334 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.62■□□□□ 0.09
GABREP78334 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.62■□□□□ 0.09
GABREP78334 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.62■□□□□ 0.09
GABREP78334 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.62■□□□□ 0.09
GABREP78334 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.62■□□□□ 0.09
GABREP78334 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.62■□□□□ 0.09
GABREP78334 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.62■□□□□ 0.09
GABREP78334 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 AC108860.2-201ENST00000562760 2183 ntBASIC15.62■□□□□ 0.09
GABREP78334 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.62■□□□□ 0.09
GABREP78334 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GABREP78334 PP12613-201ENST00000424958 2230 ntBASIC15.62■□□□□ 0.09
GABREP78334 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 AC139713.2-201ENST00000641328 2723 ntBASIC15.61■□□□□ 0.09
GABREP78334 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.61■□□□□ 0.09
GABREP78334 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.61■□□□□ 0.09
GABREP78334 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.61■□□□□ 0.09
GABREP78334 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.61■□□□□ 0.09
GABREP78334 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.61■□□□□ 0.09
GABREP78334 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
GABREP78334 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 SERBP1P3-201ENST00000459980 809 ntBASIC15.61■□□□□ 0.09
GABREP78334 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.61■□□□□ 0.09
GABREP78334 AC044860.1-202ENST00000559481 777 ntBASIC15.61■□□□□ 0.09
GABREP78334 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.61■□□□□ 0.09
GABREP78334 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.61■□□□□ 0.09
GABREP78334 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 AC004790.1-201ENST00000612686 536 ntBASIC15.61■□□□□ 0.09
GABREP78334 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
GABREP78334 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
GABREP78334 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 AC020916.1-201ENST00000587762 1774 ntBASIC15.61■□□□□ 0.09
GABREP78334 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.61■□□□□ 0.09
GABREP78334 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 AC141586.5-201ENST00000624546 2050 ntBASIC15.61■□□□□ 0.09
GABREP78334 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 AL023806.1-201ENST00000603994 1649 ntBASIC15.61■□□□□ 0.09
GABREP78334 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GABREP78334 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
GABREP78334 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.6■□□□□ 0.09
GABREP78334 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GABREP78334 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 SPDYE18-201ENST00000510091 1050 ntBASIC15.6■□□□□ 0.09
GABREP78334 AC055876.2-201ENST00000531834 546 ntBASIC15.6■□□□□ 0.09
GABREP78334 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.6■□□□□ 0.09
GABREP78334 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.6■□□□□ 0.09
GABREP78334 AC106886.1-201ENST00000568660 600 ntBASIC15.6■□□□□ 0.09
GABREP78334 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms