Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TPM4P67936 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM4P67936 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM4P67936 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TPM4P67936 AC010491.1-201ENST00000563101 2797 ntBASIC18.57■□□□□ 0.56
TPM4P67936 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM4P67936 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
TPM4P67936 KRT8P39-201ENST00000396270 1433 ntBASIC18.57■□□□□ 0.56
TPM4P67936 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM4P67936 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM4P67936 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TPM4P67936 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM4P67936 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 AL031731.1-201ENST00000642131 2094 ntBASIC18.56■□□□□ 0.56
TPM4P67936 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM4P67936 NSUN5P1-202ENST00000421140 1535 ntBASIC18.56■□□□□ 0.56
TPM4P67936 NSUN5P2-203ENST00000457352 1529 ntBASIC18.56■□□□□ 0.56
TPM4P67936 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM4P67936 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.56■□□□□ 0.56
TPM4P67936 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM4P67936 KRT17P6-201ENST00000453795 1220 ntBASIC18.56■□□□□ 0.56
TPM4P67936 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TPM4P67936 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.56■□□□□ 0.56
TPM4P67936 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TPM4P67936 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.56■□□□□ 0.56
TPM4P67936 BNIP3P18-201ENST00000593976 575 ntBASIC18.56■□□□□ 0.56
TPM4P67936 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM4P67936 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 AL512652.2-201ENST00000625156 1716 ntBASIC18.56■□□□□ 0.56
TPM4P67936 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.56■□□□□ 0.56
TPM4P67936 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM4P67936 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TPM4P67936 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.56■□□□□ 0.56
TPM4P67936 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.56■□□□□ 0.56
TPM4P67936 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM4P67936 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM4P67936 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM4P67936 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 LINC01144-201ENST00000626198 1710 ntBASIC18.55■□□□□ 0.56
TPM4P67936 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TPM4P67936 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.55■□□□□ 0.56
TPM4P67936 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 POM121L3P-201ENST00000419331 1163 ntBASIC18.55■□□□□ 0.56
TPM4P67936 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 AL353135.1-201ENST00000606729 504 ntBASIC18.55■□□□□ 0.56
TPM4P67936 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TPM4P67936 AC073592.4-201ENST00000623827 446 ntBASIC18.55■□□□□ 0.56
TPM4P67936 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TPM4P67936 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.55■□□□□ 0.56
TPM4P67936 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 AC079776.2-201ENST00000641154 1609 ntBASIC18.55■□□□□ 0.56
TPM4P67936 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM4P67936 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM4P67936 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM4P67936 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM4P67936 PCGF3-213ENST00000620529 1899 ntBASIC18.54■□□□□ 0.56
TPM4P67936 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM4P67936 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms