Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 AC080080.1-201ENST00000625121 2420 ntBASIC15.67■□□□□ 0.1
SKP1P63208 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.67■□□□□ 0.1
SKP1P63208 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SKP1P63208 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SKP1P63208 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 AC022211.2-201ENST00000585075 2527 ntBASIC15.66■□□□□ 0.1
SKP1P63208 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 GGT4P-201ENST00000623672 1708 ntBASIC15.66■□□□□ 0.1
SKP1P63208 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.66■□□□□ 0.1
SKP1P63208 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 PRYP6-201ENST00000514804 343 ntBASIC15.66■□□□□ 0.1
SKP1P63208 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 GPALPP1-207ENST00000611650 899 ntBASIC15.66■□□□□ 0.1
SKP1P63208 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SKP1P63208 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.66■□□□□ 0.1
SKP1P63208 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SKP1P63208 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SKP1P63208 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
SKP1P63208 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SKP1P63208 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SKP1P63208 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SKP1P63208 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SKP1P63208 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SKP1P63208 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SKP1P63208 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SKP1P63208 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SKP1P63208 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SKP1P63208 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.65■□□□□ 0.1
SKP1P63208 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.65■□□□□ 0.1
SKP1P63208 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.65■□□□□ 0.1
SKP1P63208 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.65■□□□□ 0.1
SKP1P63208 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.65■□□□□ 0.1
SKP1P63208 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.65■□□□□ 0.1
SKP1P63208 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.65■□□□□ 0.1
SKP1P63208 AL691403.2-201ENST00000618460 490 ntBASIC15.65■□□□□ 0.1
SKP1P63208 AC055717.3-201ENST00000622967 595 ntBASIC15.65■□□□□ 0.1
SKP1P63208 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.65■□□□□ 0.1
SKP1P63208 AL513210.1-201ENST00000629608 234 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms