Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.84□□□□□ -0.03
VBP1P61758 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.84□□□□□ -0.03
VBP1P61758 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VBP1P61758 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
VBP1P61758 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
VBP1P61758 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VBP1P61758 AC007686.3-201ENST00000619017 3487 ntBASIC14.83□□□□□ -0.03
VBP1P61758 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
VBP1P61758 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VBP1P61758 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
VBP1P61758 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.83□□□□□ -0.03
VBP1P61758 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
VBP1P61758 AC007191.1-201ENST00000623179 2995 ntBASIC14.83□□□□□ -0.03
VBP1P61758 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VBP1P61758 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.83□□□□□ -0.03
VBP1P61758 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VBP1P61758 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VBP1P61758 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VBP1P61758 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.83□□□□□ -0.04
VBP1P61758 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.83□□□□□ -0.04
VBP1P61758 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VBP1P61758 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.83□□□□□ -0.04
VBP1P61758 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.83□□□□□ -0.04
VBP1P61758 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.83□□□□□ -0.04
VBP1P61758 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.83□□□□□ -0.04
VBP1P61758 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
VBP1P61758 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VBP1P61758 AC079602.3-201ENST00000623931 403 ntBASIC14.83□□□□□ -0.04
VBP1P61758 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.83□□□□□ -0.04
VBP1P61758 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
VBP1P61758 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
VBP1P61758 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VBP1P61758 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.83□□□□□ -0.04
VBP1P61758 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.83□□□□□ -0.04
VBP1P61758 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VBP1P61758 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.83□□□□□ -0.04
VBP1P61758 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.83□□□□□ -0.04
VBP1P61758 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VBP1P61758 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
VBP1P61758 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VBP1P61758 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
VBP1P61758 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.83□□□□□ -0.04
VBP1P61758 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VBP1P61758 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VBP1P61758 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.82□□□□□ -0.04
VBP1P61758 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.82□□□□□ -0.04
VBP1P61758 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.82□□□□□ -0.04
VBP1P61758 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VBP1P61758 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VBP1P61758 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.82□□□□□ -0.04
VBP1P61758 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.82□□□□□ -0.04
VBP1P61758 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VBP1P61758 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.82□□□□□ -0.04
VBP1P61758 ECEL1P2-202ENST00000465689 757 ntBASIC14.82□□□□□ -0.04
VBP1P61758 AP003733.1-201ENST00000491725 852 ntBASIC14.82□□□□□ -0.04
VBP1P61758 AC107956.1-201ENST00000494359 873 ntBASIC14.82□□□□□ -0.04
VBP1P61758 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.82□□□□□ -0.04
VBP1P61758 AL136038.4-201ENST00000603606 1261 ntBASIC14.82□□□□□ -0.04
VBP1P61758 FAM197Y4-202ENST00000622692 608 ntBASIC14.82□□□□□ -0.04
VBP1P61758 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.82□□□□□ -0.04
VBP1P61758 GRK6P1-201ENST00000400595 1711 ntBASIC14.82□□□□□ -0.04
VBP1P61758 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VBP1P61758 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms