Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
ZC3H6P61129 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.77■■□□□ 1.08
ZC3H6P61129 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.77■■□□□ 1.08
ZC3H6P61129 RN7SL399P-201ENST00000471648 279 ntBASIC21.77■■□□□ 1.08
ZC3H6P61129 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.77■■□□□ 1.08
ZC3H6P61129 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.77■■□□□ 1.08
ZC3H6P61129 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ZC3H6P61129 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.77■■□□□ 1.08
ZC3H6P61129 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.77■■□□□ 1.08
ZC3H6P61129 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H6P61129 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
ZC3H6P61129 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZC3H6P61129 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.76■■□□□ 1.07
ZC3H6P61129 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.76■■□□□ 1.07
ZC3H6P61129 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ZC3H6P61129 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.76■■□□□ 1.07
ZC3H6P61129 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ZC3H6P61129 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.76■■□□□ 1.07
ZC3H6P61129 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.76■■□□□ 1.07
ZC3H6P61129 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.76■■□□□ 1.07
ZC3H6P61129 CYP4F24P-201ENST00000586049 1580 ntBASIC21.76■■□□□ 1.07
ZC3H6P61129 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.76■■□□□ 1.07
ZC3H6P61129 LINC01115-203ENST00000606068 577 ntBASIC21.76■■□□□ 1.07
ZC3H6P61129 GGT4P-201ENST00000623672 1708 ntBASIC21.76■■□□□ 1.07
ZC3H6P61129 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ZC3H6P61129 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H6P61129 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H6P61129 PP12613-201ENST00000424958 2230 ntBASIC21.75■■□□□ 1.07
ZC3H6P61129 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ZC3H6P61129 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H6P61129 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ZC3H6P61129 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H6P61129 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 AC099336.1-201ENST00000417053 1171 ntBASIC21.75■■□□□ 1.07
ZC3H6P61129 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ZC3H6P61129 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ZC3H6P61129 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.75■■□□□ 1.07
ZC3H6P61129 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.75■■□□□ 1.07
ZC3H6P61129 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.75■■□□□ 1.07
ZC3H6P61129 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.75■■□□□ 1.07
ZC3H6P61129 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.75■■□□□ 1.07
ZC3H6P61129 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H6P61129 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ZC3H6P61129 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H6P61129 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H6P61129 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.74■■□□□ 1.07
ZC3H6P61129 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.74■■□□□ 1.07
ZC3H6P61129 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H6P61129 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H6P61129 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ZC3H6P61129 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H6P61129 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H6P61129 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ZC3H6P61129 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H6P61129 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC21.74■■□□□ 1.07
ZC3H6P61129 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H6P61129 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.74■■□□□ 1.07
ZC3H6P61129 KLF2P4-201ENST00000451959 1225 ntBASIC21.74■■□□□ 1.07
ZC3H6P61129 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.74■■□□□ 1.07
ZC3H6P61129 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC21.74■■□□□ 1.07
ZC3H6P61129 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.74■■□□□ 1.07
ZC3H6P61129 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.74■■□□□ 1.07
ZC3H6P61129 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ZC3H6P61129 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H6P61129 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.74■■□□□ 1.07
ZC3H6P61129 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ZC3H6P61129 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ZC3H6P61129 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H6P61129 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms