Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCR4P61073 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.07■□□□□ 0
CXCR4P61073 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.07■□□□□ 0
CXCR4P61073 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CXCR4P61073 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.07■□□□□ 0
CXCR4P61073 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCR4P61073 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CXCR4P61073 AC092919.2-201ENST00000623631 1645 ntBASIC15.06■□□□□ 0
CXCR4P61073 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CXCR4P61073 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.06■□□□□ 0
CXCR4P61073 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CXCR4P61073 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.06■□□□□ 0
CXCR4P61073 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.06■□□□□ 0
CXCR4P61073 AL020989.1-201ENST00000422979 469 ntBASIC15.06■□□□□ 0
CXCR4P61073 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.06■□□□□ 0
CXCR4P61073 MINOS1P3-201ENST00000457048 203 ntBASIC15.06■□□□□ 0
CXCR4P61073 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.06■□□□□ 0
CXCR4P61073 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CXCR4P61073 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.06■□□□□ 0
CXCR4P61073 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.06■□□□□ 0
CXCR4P61073 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 Z69720.1-201ENST00000601483 472 ntBASIC15.06■□□□□ 0
CXCR4P61073 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.06■□□□□ 0
CXCR4P61073 KRT18P1-202ENST00000452408 1331 ntBASIC15.06■□□□□ 0
CXCR4P61073 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 TOP3BP1-201ENST00000420768 1380 ntBASIC15.06■□□□□ 0
CXCR4P61073 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.06■□□□□ 0
CXCR4P61073 AC233702.3-201ENST00000578656 1387 ntBASIC15.06■□□□□ 0
CXCR4P61073 AC016734.2-201ENST00000624325 1377 ntBASIC15.06■□□□□ 0
CXCR4P61073 AC136621.1-201ENST00000624017 2304 ntBASIC15.06■□□□□ 0
CXCR4P61073 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CXCR4P61073 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.06■□□□□ 0
CXCR4P61073 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CXCR4P61073 GPAA1P2-202ENST00000606848 1787 ntBASIC15.06■□□□□ 0
CXCR4P61073 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.05■□□□□ 0
CXCR4P61073 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
CXCR4P61073 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.05■□□□□ 0
CXCR4P61073 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.05■□□□□ 0
CXCR4P61073 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CXCR4P61073 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CXCR4P61073 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CXCR4P61073 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
CXCR4P61073 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CXCR4P61073 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CXCR4P61073 RCN1P1-201ENST00000400413 996 ntBASIC15.05■□□□□ -0
CXCR4P61073 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CXCR4P61073 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CXCR4P61073 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.05■□□□□ -0
CXCR4P61073 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.05■□□□□ -0
CXCR4P61073 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.05■□□□□ -0
CXCR4P61073 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CXCR4P61073 AC096582.2-201ENST00000510860 516 ntBASIC15.05■□□□□ -0
CXCR4P61073 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.05■□□□□ -0
CXCR4P61073 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CXCR4P61073 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.05■□□□□ -0
CXCR4P61073 AC005332.1-201ENST00000577698 1310 ntBASIC15.05■□□□□ -0
CXCR4P61073 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.05■□□□□ -0
CXCR4P61073 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CXCR4P61073 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.05■□□□□ -0
CXCR4P61073 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
CXCR4P61073 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.05■□□□□ -0
CXCR4P61073 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.05■□□□□ -0
CXCR4P61073 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CXCR4P61073 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.05■□□□□ -0
CXCR4P61073 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms