Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 AL671710.1-201ENST00000610245 2349 ntBASIC12.28□□□□□ -0.44
CMC4P56277 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.27□□□□□ -0.44
CMC4P56277 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CMC4P56277 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
CMC4P56277 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CMC4P56277 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.27□□□□□ -0.45
CMC4P56277 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 AC079140.1-201ENST00000508039 487 ntBASIC12.27□□□□□ -0.45
CMC4P56277 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.27□□□□□ -0.45
CMC4P56277 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 GPALPP1-207ENST00000611650 899 ntBASIC12.27□□□□□ -0.45
CMC4P56277 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.27□□□□□ -0.45
CMC4P56277 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.27□□□□□ -0.45
CMC4P56277 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CMC4P56277 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CMC4P56277 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CMC4P56277 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.26□□□□□ -0.45
CMC4P56277 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
CMC4P56277 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.26□□□□□ -0.45
CMC4P56277 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.26□□□□□ -0.45
CMC4P56277 ALG1L5P-201ENST00000482043 771 ntBASIC12.26□□□□□ -0.45
CMC4P56277 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.26□□□□□ -0.45
CMC4P56277 AC243562.1-201ENST00000560672 389 ntBASIC12.26□□□□□ -0.45
CMC4P56277 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms