Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNA5SP410-201ENST00000516285 106 ntBASIC14.73□□□□□ -0.05
GFRA1P56159 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.73□□□□□ -0.05
GFRA1P56159 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.73□□□□□ -0.05
GFRA1P56159 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 AC140878.1-201ENST00000565277 250 ntBASIC14.73□□□□□ -0.05
GFRA1P56159 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.73□□□□□ -0.05
GFRA1P56159 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.73□□□□□ -0.05
GFRA1P56159 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.72□□□□□ -0.05
GFRA1P56159 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.72□□□□□ -0.05
GFRA1P56159 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
GFRA1P56159 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
GFRA1P56159 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GFRA1P56159 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
GFRA1P56159 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.72□□□□□ -0.05
GFRA1P56159 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.72□□□□□ -0.05
GFRA1P56159 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 AC061975.2-201ENST00000581722 295 ntBASIC14.72□□□□□ -0.05
GFRA1P56159 AC024267.1-201ENST00000582320 895 ntBASIC14.72□□□□□ -0.05
GFRA1P56159 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.72□□□□□ -0.05
GFRA1P56159 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.72□□□□□ -0.05
GFRA1P56159 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 AC003101.2-201ENST00000612557 442 ntBASIC14.72□□□□□ -0.05
GFRA1P56159 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.72□□□□□ -0.05
GFRA1P56159 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.72□□□□□ -0.05
GFRA1P56159 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.72□□□□□ -0.05
GFRA1P56159 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
GFRA1P56159 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
GFRA1P56159 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.72□□□□□ -0.05
GFRA1P56159 U82695.1-201ENST00000635752 1889 ntBASIC14.72□□□□□ -0.05
GFRA1P56159 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GFRA1P56159 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.71□□□□□ -0.05
GFRA1P56159 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GFRA1P56159 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
GFRA1P56159 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GFRA1P56159 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.71□□□□□ -0.05
GFRA1P56159 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 MIR770-201ENST00000390219 98 ntBASIC14.71□□□□□ -0.05
GFRA1P56159 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.71□□□□□ -0.05
GFRA1P56159 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.71□□□□□ -0.05
GFRA1P56159 AL353705.2-201ENST00000428243 662 ntBASIC14.71□□□□□ -0.05
GFRA1P56159 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
GFRA1P56159 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
GFRA1P56159 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.71□□□□□ -0.05
GFRA1P56159 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.71□□□□□ -0.05
GFRA1P56159 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.71□□□□□ -0.05
GFRA1P56159 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.71□□□□□ -0.05
GFRA1P56159 AC005498.2-205ENST00000593218 784 ntBASIC14.71□□□□□ -0.05
GFRA1P56159 AL390955.2-201ENST00000603032 514 ntBASIC14.71□□□□□ -0.05
GFRA1P56159 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.71□□□□□ -0.05
GFRA1P56159 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GFRA1P56159 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
GFRA1P56159 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
GFRA1P56159 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GFRA1P56159 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.71□□□□□ -0.05
GFRA1P56159 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GFRA1P56159 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms