Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BRPF1P55201 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
BRPF1P55201 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.96■□□□□ 0.95
BRPF1P55201 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
BRPF1P55201 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.96■□□□□ 0.95
BRPF1P55201 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
BRPF1P55201 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 AC026691.1-201ENST00000602502 2017 ntBASIC20.96■□□□□ 0.95
BRPF1P55201 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
BRPF1P55201 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.96■□□□□ 0.95
BRPF1P55201 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.96■□□□□ 0.95
BRPF1P55201 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.96■□□□□ 0.95
BRPF1P55201 AP000344.2-201ENST00000512987 629 ntBASIC20.96■□□□□ 0.95
BRPF1P55201 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.96■□□□□ 0.95
BRPF1P55201 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.96■□□□□ 0.95
BRPF1P55201 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.96■□□□□ 0.95
BRPF1P55201 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.96■□□□□ 0.95
BRPF1P55201 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
BRPF1P55201 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.96■□□□□ 0.95
BRPF1P55201 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
BRPF1P55201 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRPF1P55201 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.96■□□□□ 0.95
BRPF1P55201 AL596087.1-201ENST00000400979 1969 ntBASIC20.96■□□□□ 0.95
BRPF1P55201 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.95■□□□□ 0.95
BRPF1P55201 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
BRPF1P55201 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
BRPF1P55201 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
BRPF1P55201 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.95■□□□□ 0.94
BRPF1P55201 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRPF1P55201 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRPF1P55201 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BRPF1P55201 PKD1P1-201ENST00000458669 6805 ntBASIC20.95■□□□□ 0.94
BRPF1P55201 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.95■□□□□ 0.94
BRPF1P55201 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.95■□□□□ 0.94
BRPF1P55201 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRPF1P55201 AC105233.2-201ENST00000523697 349 ntBASIC20.95■□□□□ 0.94
BRPF1P55201 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.95■□□□□ 0.94
BRPF1P55201 AF228730.5-201ENST00000530288 346 ntBASIC20.95■□□□□ 0.94
BRPF1P55201 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.95■□□□□ 0.94
BRPF1P55201 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.95■□□□□ 0.94
BRPF1P55201 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.95■□□□□ 0.94
BRPF1P55201 AC105339.1-204ENST00000636249 355 ntBASIC20.95■□□□□ 0.94
BRPF1P55201 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRPF1P55201 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
BRPF1P55201 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRPF1P55201 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BRPF1P55201 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRPF1P55201 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.95■□□□□ 0.94
BRPF1P55201 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.94■□□□□ 0.94
BRPF1P55201 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.94■□□□□ 0.94
BRPF1P55201 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.94■□□□□ 0.94
BRPF1P55201 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.94■□□□□ 0.94
BRPF1P55201 SPCS2P4-201ENST00000436160 681 ntBASIC20.94■□□□□ 0.94
BRPF1P55201 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.94■□□□□ 0.94
BRPF1P55201 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 KRT8P23-201ENST00000560090 1207 ntBASIC20.94■□□□□ 0.94
BRPF1P55201 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
BRPF1P55201 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.94■□□□□ 0.94
BRPF1P55201 AL513210.1-201ENST00000629608 234 ntBASIC20.94■□□□□ 0.94
BRPF1P55201 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.94■□□□□ 0.94
BRPF1P55201 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
BRPF1P55201 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
BRPF1P55201 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 AL391005.1-201ENST00000623953 2435 ntBASIC20.94■□□□□ 0.94
BRPF1P55201 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRPF1P55201 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRPF1P55201 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
BRPF1P55201 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRPF1P55201 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRPF1P55201 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
BRPF1P55201 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRPF1P55201 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRPF1P55201 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
BRPF1P55201 AL662844.4-201ENST00000606367 2838 ntBASIC20.93■□□□□ 0.94
BRPF1P55201 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.93■□□□□ 0.94
BRPF1P55201 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
BRPF1P55201 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
BRPF1P55201 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms