Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN5P54829 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN5P54829 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN5P54829 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PTPN5P54829 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN5P54829 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTPN5P54829 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTPN5P54829 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN5P54829 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN5P54829 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17■□□□□ 0.31
PTPN5P54829 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17■□□□□ 0.31
PTPN5P54829 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17■□□□□ 0.31
PTPN5P54829 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
PTPN5P54829 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17■□□□□ 0.31
PTPN5P54829 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17■□□□□ 0.31
PTPN5P54829 AC009407.1-201ENST00000568958 598 ntBASIC17■□□□□ 0.31
PTPN5P54829 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17■□□□□ 0.31
PTPN5P54829 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PTPN5P54829 AC008494.3-201ENST00000606615 944 ntBASIC17■□□□□ 0.31
PTPN5P54829 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17■□□□□ 0.31
PTPN5P54829 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN5P54829 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN5P54829 AC092053.1-201ENST00000605787 1936 ntBASIC17■□□□□ 0.31
PTPN5P54829 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PTPN5P54829 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 AC087499.5-201ENST00000452760 1342 ntBASIC16.99■□□□□ 0.31
PTPN5P54829 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN5P54829 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.99■□□□□ 0.31
PTPN5P54829 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN5P54829 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN5P54829 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN5P54829 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN5P54829 AP002490.2-201ENST00000524791 560 ntBASIC16.99■□□□□ 0.31
PTPN5P54829 AC109635.5-201ENST00000533593 962 ntBASIC16.99■□□□□ 0.31
PTPN5P54829 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN5P54829 AC007967.4-201ENST00000614700 386 ntBASIC16.99■□□□□ 0.31
PTPN5P54829 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN5P54829 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PTPN5P54829 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN5P54829 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PTPN5P54829 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN5P54829 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN5P54829 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN5P54829 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PTPN5P54829 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN5P54829 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN5P54829 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN5P54829 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PTPN5P54829 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN5P54829 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN5P54829 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN5P54829 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN5P54829 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms