Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 AL353732.1-201ENST00000569618 1459 ntBASIC15.4■□□□□ 0.06
RNF144AP50876 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF144AP50876 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
RNF144AP50876 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RNF144AP50876 MIR940-201ENST00000401276 94 ntBASIC15.39■□□□□ 0.05
RNF144AP50876 CRYGEP-201ENST00000412192 528 ntBASIC15.39■□□□□ 0.05
RNF144AP50876 AL513480.1-201ENST00000451731 511 ntBASIC15.39■□□□□ 0.05
RNF144AP50876 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 CXCL1P1-201ENST00000502804 216 ntBASIC15.39■□□□□ 0.05
RNF144AP50876 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RNF144AP50876 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 AC013467.2-201ENST00000605472 835 ntBASIC15.39■□□□□ 0.05
RNF144AP50876 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF144AP50876 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.39■□□□□ 0.05
RNF144AP50876 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF144AP50876 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF144AP50876 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF144AP50876 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF144AP50876 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF144AP50876 AC022188.1-201ENST00000620960 1664 ntBASIC15.38■□□□□ 0.05
RNF144AP50876 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF144AP50876 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
RNF144AP50876 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF144AP50876 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF144AP50876 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF144AP50876 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF144AP50876 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF144AP50876 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF144AP50876 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RNF144AP50876 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF144AP50876 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
RNF144AP50876 AC034105.1-201ENST00000563488 319 ntBASIC15.38■□□□□ 0.05
RNF144AP50876 AC091167.2-201ENST00000579581 588 ntBASIC15.38■□□□□ 0.05
RNF144AP50876 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF144AP50876 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RNF144AP50876 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF144AP50876 AC129492.6-201ENST00000611383 1305 ntBASIC15.38■□□□□ 0.05
RNF144AP50876 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF144AP50876 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF144AP50876 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 GGT4P-201ENST00000623672 1708 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms