Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PRIM2P49643 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRIM2P49643 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRIM2P49643 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRIM2P49643 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRIM2P49643 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PRIM2P49643 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
PRIM2P49643 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.76■□□□□ 0.11
PRIM2P49643 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PRIM2P49643 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PRIM2P49643 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.76■□□□□ 0.11
PRIM2P49643 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 KRT18P67-201ENST00000432816 1264 ntBASIC15.76■□□□□ 0.11
PRIM2P49643 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 AC079781.3-201ENST00000449110 356 ntBASIC15.76■□□□□ 0.11
PRIM2P49643 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.76■□□□□ 0.11
PRIM2P49643 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PRIM2P49643 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.76■□□□□ 0.11
PRIM2P49643 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.76■□□□□ 0.11
PRIM2P49643 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.76■□□□□ 0.11
PRIM2P49643 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.76■□□□□ 0.11
PRIM2P49643 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 AC005052.1-201ENST00000625181 2492 ntBASIC15.76■□□□□ 0.11
PRIM2P49643 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PRIM2P49643 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
PRIM2P49643 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.76■□□□□ 0.11
PRIM2P49643 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRIM2P49643 AC002310.6-201ENST00000624451 1377 ntBASIC15.75■□□□□ 0.11
PRIM2P49643 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.75■□□□□ 0.11
PRIM2P49643 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.75■□□□□ 0.11
PRIM2P49643 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.75■□□□□ 0.11
PRIM2P49643 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.75■□□□□ 0.11
PRIM2P49643 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.75■□□□□ 0.11
PRIM2P49643 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 FAAHP1-202ENST00000446499 1238 ntBASIC15.75■□□□□ 0.11
PRIM2P49643 AC018712.1-201ENST00000455767 687 ntBASIC15.75■□□□□ 0.11
PRIM2P49643 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PRIM2P49643 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.75■□□□□ 0.11
PRIM2P49643 AC105339.3-201ENST00000560043 636 ntBASIC15.75■□□□□ 0.11
PRIM2P49643 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.75■□□□□ 0.11
PRIM2P49643 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.75■□□□□ 0.11
PRIM2P49643 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PRIM2P49643 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms