Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.72□□□□□ -0.05
SRP9P49458 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.72□□□□□ -0.05
SRP9P49458 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.72□□□□□ -0.05
SRP9P49458 AC139887.3-201ENST00000568585 713 ntBASIC14.72□□□□□ -0.05
SRP9P49458 AL589182.2-201ENST00000619332 1049 ntBASIC14.72□□□□□ -0.05
SRP9P49458 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SRP9P49458 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.72□□□□□ -0.05
SRP9P49458 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP9P49458 AC097637.2-201ENST00000624096 1997 ntBASIC14.72□□□□□ -0.05
SRP9P49458 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP9P49458 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 PKD1P5-201ENST00000532415 10291 ntBASIC14.72□□□□□ -0.05
SRP9P49458 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
SRP9P49458 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP9P49458 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP9P49458 MTHFR-217ENST00000641820 1569 ntBASIC14.72□□□□□ -0.05
SRP9P49458 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.72□□□□□ -0.05
SRP9P49458 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
SRP9P49458 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.72□□□□□ -0.05
SRP9P49458 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP9P49458 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP9P49458 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SRP9P49458 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP9P49458 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 AL135999.2-201ENST00000622438 1686 ntBASIC14.71□□□□□ -0.05
SRP9P49458 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.71□□□□□ -0.05
SRP9P49458 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SRP9P49458 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
SRP9P49458 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.71□□□□□ -0.05
SRP9P49458 ACTG1P4-201ENST00000425123 1122 ntBASIC14.71□□□□□ -0.05
SRP9P49458 KRT18P67-201ENST00000432816 1264 ntBASIC14.71□□□□□ -0.05
SRP9P49458 RNPS1P1-201ENST00000507437 918 ntBASIC14.71□□□□□ -0.05
SRP9P49458 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.71□□□□□ -0.05
SRP9P49458 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.71□□□□□ -0.05
SRP9P49458 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.71□□□□□ -0.05
SRP9P49458 AL662844.1-201ENST00000546340 181 ntBASIC14.71□□□□□ -0.05
SRP9P49458 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.71□□□□□ -0.05
SRP9P49458 AC021087.4-201ENST00000563761 564 ntBASIC14.71□□□□□ -0.05
SRP9P49458 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.71□□□□□ -0.05
SRP9P49458 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.71□□□□□ -0.05
SRP9P49458 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.71□□□□□ -0.05
SRP9P49458 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SRP9P49458 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP9P49458 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SRP9P49458 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.71□□□□□ -0.05
SRP9P49458 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SRP9P49458 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SRP9P49458 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
SRP9P49458 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SRP9P49458 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.7□□□□□ -0.06
SRP9P49458 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SRP9P49458 AC073347.1-201ENST00000421633 2643 ntBASIC14.7□□□□□ -0.06
SRP9P49458 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 AC063926.3-201ENST00000624734 5658 ntBASIC14.7□□□□□ -0.06
SRP9P49458 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.7□□□□□ -0.06
SRP9P49458 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.7□□□□□ -0.06
SRP9P49458 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
SRP9P49458 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.7□□□□□ -0.06
SRP9P49458 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SRP9P49458 LAGE3P1-201ENST00000425356 484 ntBASIC14.7□□□□□ -0.06
SRP9P49458 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.7□□□□□ -0.06
SRP9P49458 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SRP9P49458 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms