Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC1P35251 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.4■□□□□ 0.38
RFC1P35251 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.4■□□□□ 0.38
RFC1P35251 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFC1P35251 MIR3909-201ENST00000579518 119 ntBASIC17.4■□□□□ 0.38
RFC1P35251 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC1P35251 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 AC140113.2-201ENST00000604370 208 ntBASIC17.4■□□□□ 0.38
RFC1P35251 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC1P35251 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 LINC01144-201ENST00000626198 1710 ntBASIC17.4■□□□□ 0.38
RFC1P35251 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC1P35251 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC1P35251 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFC1P35251 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RFC1P35251 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.39■□□□□ 0.38
RFC1P35251 AC007326.2-201ENST00000624224 7579 ntBASIC17.39■□□□□ 0.38
RFC1P35251 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RFC1P35251 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.39■□□□□ 0.37
RFC1P35251 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.39■□□□□ 0.37
RFC1P35251 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RFC1P35251 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
RFC1P35251 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RFC1P35251 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RFC1P35251 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.39■□□□□ 0.37
RFC1P35251 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.39■□□□□ 0.37
RFC1P35251 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.39■□□□□ 0.37
RFC1P35251 AC021097.1-201ENST00000607902 574 ntBASIC17.39■□□□□ 0.37
RFC1P35251 AC027601.4-201ENST00000611259 610 ntBASIC17.39■□□□□ 0.37
RFC1P35251 AC020765.3-201ENST00000613051 740 ntBASIC17.39■□□□□ 0.37
RFC1P35251 AL513190.1-201ENST00000621254 727 ntBASIC17.39■□□□□ 0.37
RFC1P35251 AC068587.6-202ENST00000641839 5619 ntBASIC17.39■□□□□ 0.37
RFC1P35251 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.39■□□□□ 0.37
RFC1P35251 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC1P35251 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RFC1P35251 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 AC063926.3-201ENST00000624734 5658 ntBASIC17.39■□□□□ 0.37
RFC1P35251 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC1P35251 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.38■□□□□ 0.37
RFC1P35251 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFC1P35251 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms