Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CHMLP26374 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 PKD1P1-201ENST00000458669 6805 ntBASIC19.85■□□□□ 0.77
CHMLP26374 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CHMLP26374 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMLP26374 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHMLP26374 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMLP26374 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHMLP26374 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMLP26374 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHMLP26374 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.84■□□□□ 0.77
CHMLP26374 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 CDC14C-201ENST00000428251 1719 ntBASIC19.84■□□□□ 0.77
CHMLP26374 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMLP26374 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHMLP26374 WASH6P-202ENST00000359512 1437 ntBASIC19.84■□□□□ 0.77
CHMLP26374 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMLP26374 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMLP26374 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMLP26374 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMLP26374 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMLP26374 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.83■□□□□ 0.77
CHMLP26374 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.83■□□□□ 0.77
CHMLP26374 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.83■□□□□ 0.77
CHMLP26374 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CHMLP26374 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.83■□□□□ 0.77
CHMLP26374 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.83■□□□□ 0.77
CHMLP26374 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMLP26374 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.83■□□□□ 0.76
CHMLP26374 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMLP26374 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMLP26374 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMLP26374 AC112504.1-201ENST00000623415 1841 ntBASIC19.83■□□□□ 0.76
CHMLP26374 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMLP26374 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMLP26374 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMLP26374 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CHMLP26374 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHMLP26374 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CHMLP26374 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMLP26374 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CHMLP26374 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CHMLP26374 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHMLP26374 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHMLP26374 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 AC023274.1-201ENST00000418278 595 ntBASIC19.82■□□□□ 0.76
CHMLP26374 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.82■□□□□ 0.76
CHMLP26374 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.82■□□□□ 0.76
CHMLP26374 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMLP26374 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.82■□□□□ 0.76
CHMLP26374 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHMLP26374 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMLP26374 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 AC132872.4-202ENST00000622924 2756 ntBASIC19.82■□□□□ 0.76
CHMLP26374 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHMLP26374 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMLP26374 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMLP26374 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms