Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP24386 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.48■□□□□ 0.07
CHMP24386 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP24386 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.48■□□□□ 0.07
CHMP24386 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.48■□□□□ 0.07
CHMP24386 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 AC006538.1-201ENST00000567905 1585 ntBASIC15.48■□□□□ 0.07
CHMP24386 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP24386 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP24386 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP24386 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHMP24386 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CHMP24386 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP24386 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CHMP24386 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CHMP24386 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP24386 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP24386 VN2R19P-201ENST00000442399 1052 ntBASIC15.47■□□□□ 0.07
CHMP24386 KRT18P3-201ENST00000451602 1288 ntBASIC15.47■□□□□ 0.07
CHMP24386 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP24386 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.47■□□□□ 0.07
CHMP24386 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.47■□□□□ 0.07
CHMP24386 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.47■□□□□ 0.07
CHMP24386 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 POLD2P1-201ENST00000511220 997 ntBASIC15.47■□□□□ 0.07
CHMP24386 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.47■□□□□ 0.07
CHMP24386 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 MIR4751-201ENST00000578027 74 ntBASIC15.47■□□□□ 0.07
CHMP24386 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP24386 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CHMP24386 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.47■□□□□ 0.07
CHMP24386 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHMP24386 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.47■□□□□ 0.07
CHMP24386 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.46■□□□□ 0.07
CHMP24386 LINC00895-201ENST00000629028 1637 ntBASIC15.46■□□□□ 0.07
CHMP24386 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
CHMP24386 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CHMP24386 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CHMP24386 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CHMP24386 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
CHMP24386 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.46■□□□□ 0.07
CHMP24386 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CHMP24386 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.46■□□□□ 0.07
CHMP24386 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CHMP24386 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.46■□□□□ 0.07
CHMP24386 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.46■□□□□ 0.07
CHMP24386 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.46■□□□□ 0.07
CHMP24386 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.46■□□□□ 0.07
CHMP24386 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.46■□□□□ 0.07
CHMP24386 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHMP24386 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms