Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 MTHFR-217ENST00000641820 1569 ntBASIC16.65■□□□□ 0.26
HLA-DPA1P20036 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 AC002347.1-201ENST00000569543 541 ntBASIC16.65■□□□□ 0.26
HLA-DPA1P20036 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DPA1P20036 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 AC023274.1-201ENST00000418278 595 ntBASIC16.64■□□□□ 0.25
HLA-DPA1P20036 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 PGAM5P1-201ENST00000518923 814 ntBASIC16.64■□□□□ 0.25
HLA-DPA1P20036 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 AC016027.1-202ENST00000607927 1699 ntBASIC16.64■□□□□ 0.25
HLA-DPA1P20036 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPA1P20036 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 WASH6P-202ENST00000359512 1437 ntBASIC16.63■□□□□ 0.25
HLA-DPA1P20036 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms