Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VCLP18206 TOP3BP1-201ENST00000420768 1380 ntBASIC16.64■□□□□ 0.26
VCLP18206 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VCLP18206 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
VCLP18206 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.64■□□□□ 0.26
VCLP18206 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.64■□□□□ 0.25
VCLP18206 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 AL136379.1-201ENST00000623471 2642 ntBASIC16.64■□□□□ 0.25
VCLP18206 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VCLP18206 AC004832.2-201ENST00000426397 482 ntBASIC16.64■□□□□ 0.25
VCLP18206 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VCLP18206 KRT18P2-201ENST00000447938 1258 ntBASIC16.64■□□□□ 0.25
VCLP18206 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.64■□□□□ 0.25
VCLP18206 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
VCLP18206 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.64■□□□□ 0.25
VCLP18206 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.64■□□□□ 0.25
VCLP18206 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.64■□□□□ 0.25
VCLP18206 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.64■□□□□ 0.25
VCLP18206 DUX4L17-201ENST00000557360 1267 ntBASIC16.64■□□□□ 0.25
VCLP18206 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VCLP18206 AC091167.2-201ENST00000579581 588 ntBASIC16.64■□□□□ 0.25
VCLP18206 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.64■□□□□ 0.25
VCLP18206 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.64■□□□□ 0.25
VCLP18206 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.64■□□□□ 0.25
VCLP18206 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.64■□□□□ 0.25
VCLP18206 AC004877.2-201ENST00000623941 599 ntBASIC16.64■□□□□ 0.25
VCLP18206 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.64■□□□□ 0.25
VCLP18206 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
VCLP18206 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
VCLP18206 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
VCLP18206 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VCLP18206 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
VCLP18206 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.63■□□□□ 0.25
VCLP18206 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.63■□□□□ 0.25
VCLP18206 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.63■□□□□ 0.25
VCLP18206 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.63■□□□□ 0.25
VCLP18206 KRT18P13-201ENST00000400056 1290 ntBASIC16.63■□□□□ 0.25
VCLP18206 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
VCLP18206 AC023274.1-201ENST00000418278 595 ntBASIC16.63■□□□□ 0.25
VCLP18206 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 AC107918.2-201ENST00000530817 355 ntBASIC16.63■□□□□ 0.25
VCLP18206 AC092865.5-201ENST00000545435 363 ntBASIC16.63■□□□□ 0.25
VCLP18206 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.63■□□□□ 0.25
VCLP18206 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.63■□□□□ 0.25
VCLP18206 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.63■□□□□ 0.25
VCLP18206 MIR3687-2-201ENST00000577708 61 ntBASIC16.63■□□□□ 0.25
VCLP18206 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.63■□□□□ 0.25
VCLP18206 MTDHP5-201ENST00000598980 586 ntBASIC16.63■□□□□ 0.25
VCLP18206 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.63■□□□□ 0.25
VCLP18206 MIR3687-1-201ENST00000614492 61 ntBASIC16.63■□□□□ 0.25
VCLP18206 REXO1L3P-201ENST00000622202 1288 ntBASIC16.63■□□□□ 0.25
VCLP18206 AP001350.2-201ENST00000625104 1094 ntBASIC16.63■□□□□ 0.25
VCLP18206 AL645728.2-201ENST00000641974 660 ntBASIC16.63■□□□□ 0.25
VCLP18206 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.63■□□□□ 0.25
VCLP18206 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.63■□□□□ 0.25
VCLP18206 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
VCLP18206 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VCLP18206 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VCLP18206 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VCLP18206 AC092171.3-201ENST00000610122 2651 ntBASIC16.63■□□□□ 0.25
VCLP18206 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.62■□□□□ 0.25
VCLP18206 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
VCLP18206 KRT8P49-201ENST00000604166 1432 ntBASIC16.62■□□□□ 0.25
VCLP18206 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms