Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.5□□□□□ -0.25
DEFA4P12838 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.5□□□□□ -0.25
DEFA4P12838 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DEFA4P12838 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 FRMD8P1-201ENST00000440433 1524 ntBASIC13.49□□□□□ -0.25
DEFA4P12838 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
DEFA4P12838 AC004817.3-201ENST00000602957 2129 ntBASIC13.49□□□□□ -0.25
DEFA4P12838 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 AL356309.3-201ENST00000624132 1934 ntBASIC13.49□□□□□ -0.25
DEFA4P12838 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.49□□□□□ -0.25
DEFA4P12838 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
DEFA4P12838 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
DEFA4P12838 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.49□□□□□ -0.25
DEFA4P12838 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.49□□□□□ -0.25
DEFA4P12838 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.49□□□□□ -0.25
DEFA4P12838 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.49□□□□□ -0.25
DEFA4P12838 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.49□□□□□ -0.25
DEFA4P12838 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.49□□□□□ -0.25
DEFA4P12838 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 MTDHP3-201ENST00000594186 672 ntBASIC13.49□□□□□ -0.25
DEFA4P12838 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.49□□□□□ -0.25
DEFA4P12838 AP001269.4-201ENST00000609611 512 ntBASIC13.49□□□□□ -0.25
DEFA4P12838 AL139288.1-201ENST00000623748 933 ntBASIC13.49□□□□□ -0.25
DEFA4P12838 AL022326.1-202ENST00000641533 845 ntBASIC13.49□□□□□ -0.25
DEFA4P12838 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
DEFA4P12838 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
DEFA4P12838 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
DEFA4P12838 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
DEFA4P12838 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.49□□□□□ -0.25
DEFA4P12838 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.49□□□□□ -0.25
DEFA4P12838 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.49□□□□□ -0.25
DEFA4P12838 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.49□□□□□ -0.25
DEFA4P12838 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
DEFA4P12838 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.48□□□□□ -0.25
DEFA4P12838 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 NCF1C-201ENST00000438382 1427 ntBASIC13.48□□□□□ -0.25
DEFA4P12838 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.48□□□□□ -0.25
DEFA4P12838 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.48□□□□□ -0.25
DEFA4P12838 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.48□□□□□ -0.25
DEFA4P12838 SCARNA2-201ENST00000458748 420 ntBASIC13.48□□□□□ -0.25
DEFA4P12838 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.48□□□□□ -0.25
DEFA4P12838 KRT18P31-201ENST00000506277 1292 ntBASIC13.48□□□□□ -0.25
DEFA4P12838 AC106795.1-205ENST00000512851 1056 ntBASIC13.48□□□□□ -0.25
DEFA4P12838 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.48□□□□□ -0.25
DEFA4P12838 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DEFA4P12838 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.48□□□□□ -0.25
DEFA4P12838 AC073592.4-201ENST00000623827 446 ntBASIC13.48□□□□□ -0.25
DEFA4P12838 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.48□□□□□ -0.25
DEFA4P12838 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms