Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TPM1P09493 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.26■□□□□ 0.51
TPM1P09493 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.26■□□□□ 0.51
TPM1P09493 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TPM1P09493 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TPM1P09493 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM1P09493 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.26■□□□□ 0.51
TPM1P09493 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM1P09493 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.26■□□□□ 0.51
TPM1P09493 AC073592.4-201ENST00000623827 446 ntBASIC18.26■□□□□ 0.51
TPM1P09493 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TPM1P09493 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TPM1P09493 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TPM1P09493 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 AC079776.2-201ENST00000641154 1609 ntBASIC18.26■□□□□ 0.51
TPM1P09493 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.26■□□□□ 0.51
TPM1P09493 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.26■□□□□ 0.51
TPM1P09493 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM1P09493 AL671710.1-201ENST00000610245 2349 ntBASIC18.26■□□□□ 0.51
TPM1P09493 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 OR2I1P-209ENST00000641730 5365 ntBASIC18.26■□□□□ 0.51
TPM1P09493 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM1P09493 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM1P09493 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.25■□□□□ 0.51
TPM1P09493 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 ABCD1P5-201ENST00000445663 754 ntBASIC18.25■□□□□ 0.51
TPM1P09493 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.25■□□□□ 0.51
TPM1P09493 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.25■□□□□ 0.51
TPM1P09493 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TPM1P09493 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM1P09493 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM1P09493 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TPM1P09493 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TPM1P09493 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TPM1P09493 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM1P09493 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM1P09493 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM1P09493 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms