Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TPM3P06753 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM3P06753 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.57■□□□□ 0.56
TPM3P06753 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM3P06753 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM3P06753 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM3P06753 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.56■□□□□ 0.56
TPM3P06753 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 AC097637.2-201ENST00000624096 1997 ntBASIC18.56■□□□□ 0.56
TPM3P06753 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.56■□□□□ 0.56
TPM3P06753 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 AC063952.2-201ENST00000498792 1227 ntBASIC18.56■□□□□ 0.56
TPM3P06753 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.56■□□□□ 0.56
TPM3P06753 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TPM3P06753 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TPM3P06753 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM3P06753 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM3P06753 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TPM3P06753 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM3P06753 AL161772.1-201ENST00000610494 4412 ntBASIC18.56■□□□□ 0.56
TPM3P06753 AC112504.1-201ENST00000623415 1841 ntBASIC18.56■□□□□ 0.56
TPM3P06753 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM3P06753 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TPM3P06753 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
TPM3P06753 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM3P06753 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM3P06753 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.55■□□□□ 0.56
TPM3P06753 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.55■□□□□ 0.56
TPM3P06753 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM3P06753 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM3P06753 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM3P06753 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM3P06753 CDC14C-201ENST00000428251 1719 ntBASIC18.54■□□□□ 0.56
TPM3P06753 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.54■□□□□ 0.56
TPM3P06753 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.54■□□□□ 0.56
TPM3P06753 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TPM3P06753 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
TPM3P06753 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.54■□□□□ 0.56
TPM3P06753 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM3P06753 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.54■□□□□ 0.56
TPM3P06753 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms