Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD3DP04234 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD3DP04234 AC004817.3-201ENST00000602957 2129 ntBASIC14.05□□□□□ -0.16
CD3DP04234 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.05□□□□□ -0.16
CD3DP04234 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD3DP04234 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD3DP04234 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.04□□□□□ -0.16
CD3DP04234 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CD3DP04234 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.04□□□□□ -0.16
CD3DP04234 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.04□□□□□ -0.16
CD3DP04234 AC136621.1-201ENST00000624017 2304 ntBASIC14.04□□□□□ -0.16
CD3DP04234 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.04□□□□□ -0.16
CD3DP04234 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.04□□□□□ -0.16
CD3DP04234 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.04□□□□□ -0.16
CD3DP04234 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.04□□□□□ -0.16
CD3DP04234 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CD3DP04234 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.04□□□□□ -0.16
CD3DP04234 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 AL020989.1-201ENST00000422979 469 ntBASIC14.04□□□□□ -0.16
CD3DP04234 TSPY22P-201ENST00000427496 604 ntBASIC14.04□□□□□ -0.16
CD3DP04234 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.04□□□□□ -0.16
CD3DP04234 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.04□□□□□ -0.16
CD3DP04234 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.04□□□□□ -0.16
CD3DP04234 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.04□□□□□ -0.16
CD3DP04234 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 KRT8P39-201ENST00000396270 1433 ntBASIC14.04□□□□□ -0.16
CD3DP04234 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.04□□□□□ -0.16
CD3DP04234 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CD3DP04234 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.04□□□□□ -0.16
CD3DP04234 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 PMPCAP1-201ENST00000508114 1576 ntBASIC14.04□□□□□ -0.16
CD3DP04234 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.04□□□□□ -0.16
CD3DP04234 LINC01144-201ENST00000626198 1710 ntBASIC14.04□□□□□ -0.16
CD3DP04234 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.04□□□□□ -0.16
CD3DP04234 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD3DP04234 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD3DP04234 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.03□□□□□ -0.16
CD3DP04234 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CD3DP04234 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 LINC00982-205ENST00000420957 435 ntBASIC14.03□□□□□ -0.16
CD3DP04234 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CD3DP04234 IGHV3-41-201ENST00000613121 348 ntBASIC14.03□□□□□ -0.16
CD3DP04234 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.03□□□□□ -0.16
CD3DP04234 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.03□□□□□ -0.16
CD3DP04234 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.03□□□□□ -0.16
CD3DP04234 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.03□□□□□ -0.16
CD3DP04234 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CD3DP04234 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD3DP04234 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.03□□□□□ -0.16
CD3DP04234 AC006486.2-201ENST00000624246 2199 ntBASIC14.03□□□□□ -0.16
CD3DP04234 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CD3DP04234 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.03□□□□□ -0.16
CD3DP04234 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CD3DP04234 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CD3DP04234 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CD3DP04234 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD3DP04234 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CD3DP04234 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD3DP04234 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.02□□□□□ -0.16
CD3DP04234 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CD3DP04234 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms