Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.9□□□□□ -0.18
CD74P04233 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
CD74P04233 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CD74P04233 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.89□□□□□ -0.19
CD74P04233 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.89□□□□□ -0.19
CD74P04233 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.89□□□□□ -0.19
CD74P04233 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CD74P04233 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.89□□□□□ -0.19
CD74P04233 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.89□□□□□ -0.19
CD74P04233 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.89□□□□□ -0.19
CD74P04233 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.89□□□□□ -0.19
CD74P04233 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.89□□□□□ -0.19
CD74P04233 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.89□□□□□ -0.19
CD74P04233 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.89□□□□□ -0.19
CD74P04233 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.89□□□□□ -0.19
CD74P04233 AP005901.3-202ENST00000581653 237 ntBASIC13.89□□□□□ -0.19
CD74P04233 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CD74P04233 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD74P04233 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.89□□□□□ -0.19
CD74P04233 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 AC131009.4-201ENST00000624048 1740 ntBASIC13.89□□□□□ -0.19
CD74P04233 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CD74P04233 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD74P04233 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CD74P04233 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 TERF1P1-201ENST00000311003 1181 ntBASIC13.88□□□□□ -0.19
CD74P04233 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 AC113347.1-201ENST00000413321 391 ntBASIC13.88□□□□□ -0.19
CD74P04233 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.88□□□□□ -0.19
CD74P04233 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.88□□□□□ -0.19
CD74P04233 KRT8P26-201ENST00000534154 1276 ntBASIC13.88□□□□□ -0.19
CD74P04233 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CD74P04233 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.88□□□□□ -0.19
CD74P04233 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms