Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.12■□□□□ 0.49
CD4P01730 AC092068.3-201ENST00000587894 2016 ntBASIC18.11■□□□□ 0.49
CD4P01730 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 AC005332.8-201ENST00000622750 2735 ntBASIC18.11■□□□□ 0.49
CD4P01730 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CD4P01730 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CD4P01730 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 MIR658-201ENST00000385210 100 ntBASIC18.11■□□□□ 0.49
CD4P01730 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.11■□□□□ 0.49
CD4P01730 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.11■□□□□ 0.49
CD4P01730 AC022210.1-201ENST00000449856 793 ntBASIC18.11■□□□□ 0.49
CD4P01730 RN7SL837P-201ENST00000463010 287 ntBASIC18.11■□□□□ 0.49
CD4P01730 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.11■□□□□ 0.49
CD4P01730 AC055876.2-201ENST00000531834 546 ntBASIC18.11■□□□□ 0.49
CD4P01730 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.11■□□□□ 0.49
CD4P01730 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.11■□□□□ 0.49
CD4P01730 SRD5A3P1-201ENST00000603021 949 ntBASIC18.11■□□□□ 0.49
CD4P01730 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
CD4P01730 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.11■□□□□ 0.49
CD4P01730 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CD4P01730 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.11■□□□□ 0.49
CD4P01730 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CD4P01730 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.11■□□□□ 0.49
CD4P01730 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CD4P01730 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD4P01730 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.1■□□□□ 0.49
CD4P01730 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 SNX33P1-201ENST00000592116 1762 ntBASIC18.1■□□□□ 0.49
CD4P01730 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.1■□□□□ 0.49
CD4P01730 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CD4P01730 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 AP002490.2-201ENST00000524791 560 ntBASIC18.1■□□□□ 0.49
CD4P01730 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CD4P01730 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CD4P01730 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.1■□□□□ 0.49
CD4P01730 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.1■□□□□ 0.49
CD4P01730 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.1■□□□□ 0.49
CD4P01730 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CD4P01730 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
CD4P01730 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD4P01730 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.09■□□□□ 0.49
CD4P01730 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.09■□□□□ 0.49
CD4P01730 KRT8P12-202ENST00000472924 1397 ntBASIC18.09■□□□□ 0.49
CD4P01730 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CD4P01730 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.09■□□□□ 0.49
CD4P01730 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.09■□□□□ 0.49
CD4P01730 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD4P01730 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.09■□□□□ 0.49
CD4P01730 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.09■□□□□ 0.49
CD4P01730 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms