Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.45■□□□□ 0.38
ZBED1O96006 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.45■□□□□ 0.38
ZBED1O96006 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.45■□□□□ 0.38
ZBED1O96006 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.45■□□□□ 0.38
ZBED1O96006 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.45■□□□□ 0.38
ZBED1O96006 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.45■□□□□ 0.38
ZBED1O96006 AL135744.1-201ENST00000565098 629 ntBASIC17.45■□□□□ 0.38
ZBED1O96006 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.45■□□□□ 0.38
ZBED1O96006 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.45■□□□□ 0.38
ZBED1O96006 AC026120.1-201ENST00000611536 926 ntBASIC17.45■□□□□ 0.38
ZBED1O96006 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.45■□□□□ 0.38
ZBED1O96006 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ZBED1O96006 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.45■□□□□ 0.38
ZBED1O96006 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ZBED1O96006 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.45■□□□□ 0.38
ZBED1O96006 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 HLA-A-202ENST00000376806 1854 ntBASIC17.45■□□□□ 0.38
ZBED1O96006 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ZBED1O96006 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
ZBED1O96006 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZBED1O96006 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ZBED1O96006 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.45■□□□□ 0.38
ZBED1O96006 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ZBED1O96006 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZBED1O96006 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 RPS8P6-201ENST00000426177 609 ntBASIC17.44■□□□□ 0.38
ZBED1O96006 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.44■□□□□ 0.38
ZBED1O96006 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 RN7SL589P-201ENST00000481268 310 ntBASIC17.44■□□□□ 0.38
ZBED1O96006 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.44■□□□□ 0.38
ZBED1O96006 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.44■□□□□ 0.38
ZBED1O96006 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.44■□□□□ 0.38
ZBED1O96006 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 AC105339.1-204ENST00000636249 355 ntBASIC17.44■□□□□ 0.38
ZBED1O96006 AC079781.4-201ENST00000641908 219 ntBASIC17.44■□□□□ 0.38
ZBED1O96006 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
ZBED1O96006 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZBED1O96006 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZBED1O96006 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.43■□□□□ 0.38
ZBED1O96006 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
ZBED1O96006 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 AL031731.1-201ENST00000642131 2094 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZBED1O96006 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.43■□□□□ 0.38
ZBED1O96006 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ZBED1O96006 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.43■□□□□ 0.38
ZBED1O96006 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZBED1O96006 AC254562.1-201ENST00000417586 456 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.43■□□□□ 0.38
ZBED1O96006 SPDYE11-202ENST00000450699 704 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 TIMM8BP1-201ENST00000452384 211 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 KRT8P48-201ENST00000515599 1220 ntBASIC17.43■□□□□ 0.38
ZBED1O96006 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms