Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 AC093724.1-201ENST00000448659 1027 ntBASIC17.15■□□□□ 0.34
LRCH4O75427 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
LRCH4O75427 KRT18P34-201ENST00000488218 1270 ntBASIC17.15■□□□□ 0.34
LRCH4O75427 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.15■□□□□ 0.34
LRCH4O75427 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LRCH4O75427 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH4O75427 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH4O75427 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.34
LRCH4O75427 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.14■□□□□ 0.33
LRCH4O75427 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 AC022188.1-201ENST00000620960 1664 ntBASIC17.14■□□□□ 0.33
LRCH4O75427 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.14■□□□□ 0.33
LRCH4O75427 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.14■□□□□ 0.33
LRCH4O75427 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.14■□□□□ 0.33
LRCH4O75427 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.14■□□□□ 0.33
LRCH4O75427 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.14■□□□□ 0.33
LRCH4O75427 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRCH4O75427 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRCH4O75427 AC007950.2-201ENST00000615045 2347 ntBASIC17.14■□□□□ 0.33
LRCH4O75427 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.14■□□□□ 0.33
LRCH4O75427 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
LRCH4O75427 AC008894.3-201ENST00000624324 3103 ntBASIC17.14■□□□□ 0.33
LRCH4O75427 U82695.1-201ENST00000635752 1889 ntBASIC17.14■□□□□ 0.33
LRCH4O75427 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.13■□□□□ 0.33
LRCH4O75427 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.13■□□□□ 0.33
LRCH4O75427 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.13■□□□□ 0.33
LRCH4O75427 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRCH4O75427 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.13■□□□□ 0.33
LRCH4O75427 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRCH4O75427 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.13■□□□□ 0.33
LRCH4O75427 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 AC099522.2-201ENST00000607001 744 ntBASIC17.13■□□□□ 0.33
LRCH4O75427 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.13■□□□□ 0.33
LRCH4O75427 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRCH4O75427 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 AC010491.1-201ENST00000563101 2797 ntBASIC17.13■□□□□ 0.33
LRCH4O75427 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
LRCH4O75427 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRCH4O75427 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.13■□□□□ 0.33
LRCH4O75427 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.13■□□□□ 0.33
LRCH4O75427 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.13■□□□□ 0.33
LRCH4O75427 WASH6P-202ENST00000359512 1437 ntBASIC17.13■□□□□ 0.33
LRCH4O75427 AC073439.1-201ENST00000624121 1774 ntBASIC17.12■□□□□ 0.33
LRCH4O75427 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
LRCH4O75427 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LRCH4O75427 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRCH4O75427 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LRCH4O75427 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRCH4O75427 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRCH4O75427 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRCH4O75427 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms