Protein–RNA interactions for Protein: O75419

CDC45, Cell division control protein 45 homolog, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45O75419 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDC45O75419 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CDC45O75419 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.06■□□□□ 0.8
CDC45O75419 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.06■□□□□ 0.8
CDC45O75419 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.06■□□□□ 0.8
CDC45O75419 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDC45O75419 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDC45O75419 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.06■□□□□ 0.8
CDC45O75419 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.06■□□□□ 0.8
CDC45O75419 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.06■□□□□ 0.8
CDC45O75419 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 MIR3909-201ENST00000579518 119 ntBASIC20.06■□□□□ 0.8
CDC45O75419 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDC45O75419 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 AC112504.1-201ENST00000623415 1841 ntBASIC20.06■□□□□ 0.8
CDC45O75419 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.06■□□□□ 0.8
CDC45O75419 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.06■□□□□ 0.8
CDC45O75419 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.06■□□□□ 0.8
CDC45O75419 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDC45O75419 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC45O75419 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC45O75419 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CDC45O75419 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 MIR648-201ENST00000385046 94 ntBASIC20.05■□□□□ 0.8
CDC45O75419 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC45O75419 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.05■□□□□ 0.8
CDC45O75419 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.05■□□□□ 0.8
CDC45O75419 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC45O75419 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.05■□□□□ 0.8
CDC45O75419 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.05■□□□□ 0.8
CDC45O75419 AL031008.1-201ENST00000619963 541 ntBASIC20.05■□□□□ 0.8
CDC45O75419 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC45O75419 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CDC45O75419 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CDC45O75419 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDC45O75419 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.05■□□□□ 0.8
CDC45O75419 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC45O75419 AC069224.1-201ENST00000566372 1715 ntBASIC20.05■□□□□ 0.8
CDC45O75419 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.04■□□□□ 0.8
CDC45O75419 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.04■□□□□ 0.8
CDC45O75419 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC45O75419 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.04■□□□□ 0.8
CDC45O75419 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.04■□□□□ 0.8
CDC45O75419 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.04■□□□□ 0.8
CDC45O75419 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDC45O75419 RN7SL510P-201ENST00000581311 263 ntBASIC20.04■□□□□ 0.8
CDC45O75419 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC45O75419 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.04■□□□□ 0.8
CDC45O75419 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC45O75419 AL645728.2-201ENST00000641974 660 ntBASIC20.04■□□□□ 0.8
CDC45O75419 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDC45O75419 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.04■□□□□ 0.8
CDC45O75419 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC45O75419 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC45O75419 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC45O75419 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC45O75419 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC45O75419 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.03■□□□□ 0.8
CDC45O75419 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms