Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF40O75150 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF40O75150 CRYGEP-201ENST00000412192 528 ntBASIC17.89■□□□□ 0.45
RNF40O75150 AP006288.1-201ENST00000446065 395 ntBASIC17.89■□□□□ 0.45
RNF40O75150 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF40O75150 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF40O75150 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF40O75150 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF40O75150 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF40O75150 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF40O75150 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF40O75150 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
RNF40O75150 MIR4751-201ENST00000578027 74 ntBASIC17.89■□□□□ 0.45
RNF40O75150 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF40O75150 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF40O75150 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF40O75150 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF40O75150 AC148477.5-201ENST00000625164 1645 ntBASIC17.89■□□□□ 0.45
RNF40O75150 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF40O75150 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF40O75150 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF40O75150 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF40O75150 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF40O75150 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF40O75150 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 AL353593.2-201ENST00000602529 1483 ntBASIC17.88■□□□□ 0.45
RNF40O75150 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
RNF40O75150 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF40O75150 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
RNF40O75150 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF40O75150 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.88■□□□□ 0.45
RNF40O75150 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF40O75150 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 SLC25A1P3-201ENST00000395415 828 ntBASIC17.88■□□□□ 0.45
RNF40O75150 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF40O75150 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF40O75150 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF40O75150 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF40O75150 AC108073.2-201ENST00000464002 357 ntBASIC17.88■□□□□ 0.45
RNF40O75150 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.88■□□□□ 0.45
RNF40O75150 AC005829.1-201ENST00000570002 483 ntBASIC17.88■□□□□ 0.45
RNF40O75150 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF40O75150 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF40O75150 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF40O75150 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF40O75150 AC132938.5-201ENST00000624980 1813 ntBASIC17.88■□□□□ 0.45
RNF40O75150 AC002310.6-201ENST00000624451 1377 ntBASIC17.88■□□□□ 0.45
RNF40O75150 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RNF40O75150 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RNF40O75150 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF40O75150 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF40O75150 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF40O75150 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 NFIC-211ENST00000641145 8399 ntBASIC17.87■□□□□ 0.45
RNF40O75150 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 AC126177.1-201ENST00000547829 2218 ntBASIC17.87■□□□□ 0.45
RNF40O75150 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF40O75150 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF40O75150 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF40O75150 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.87■□□□□ 0.45
RNF40O75150 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF40O75150 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF40O75150 ALG1L5P-201ENST00000482043 771 ntBASIC17.87■□□□□ 0.45
RNF40O75150 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
RNF40O75150 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF40O75150 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF40O75150 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF40O75150 AC092865.6-201ENST00000642101 219 ntBASIC17.87■□□□□ 0.45
RNF40O75150 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF40O75150 NCF1C-201ENST00000438382 1427 ntBASIC17.87■□□□□ 0.45
RNF40O75150 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF40O75150 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF40O75150 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF40O75150 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF40O75150 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RNF40O75150 AL049757.1-201ENST00000616842 1596 ntBASIC17.87■□□□□ 0.45
RNF40O75150 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RNF40O75150 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF40O75150 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF40O75150 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF40O75150 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF40O75150 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms