Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.15■□□□□ 0.66
CTNND1O60716 CHCHD2P3-201ENST00000603038 451 ntBASIC19.15■□□□□ 0.66
CTNND1O60716 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CTNND1O60716 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.15■□□□□ 0.66
CTNND1O60716 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CTNND1O60716 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CTNND1O60716 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.15■□□□□ 0.66
CTNND1O60716 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTNND1O60716 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTNND1O60716 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.14■□□□□ 0.66
CTNND1O60716 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CTNND1O60716 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.14■□□□□ 0.65
CTNND1O60716 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNND1O60716 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNND1O60716 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CTNND1O60716 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 AP006294.1-201ENST00000415407 339 ntBASIC19.14■□□□□ 0.65
CTNND1O60716 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.14■□□□□ 0.65
CTNND1O60716 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.14■□□□□ 0.65
CTNND1O60716 SPDYE18-201ENST00000510091 1050 ntBASIC19.14■□□□□ 0.65
CTNND1O60716 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.14■□□□□ 0.65
CTNND1O60716 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CTNND1O60716 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.14■□□□□ 0.65
CTNND1O60716 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTNND1O60716 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.14■□□□□ 0.65
CTNND1O60716 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.14■□□□□ 0.65
CTNND1O60716 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNND1O60716 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.14■□□□□ 0.65
CTNND1O60716 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTNND1O60716 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CTNND1O60716 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.14■□□□□ 0.65
CTNND1O60716 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 AC141586.5-201ENST00000624546 2050 ntBASIC19.13■□□□□ 0.65
CTNND1O60716 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
CTNND1O60716 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTNND1O60716 ATP5G2P4-201ENST00000442175 420 ntBASIC19.13■□□□□ 0.65
CTNND1O60716 INE1-201ENST00000456273 945 ntBASIC19.13■□□□□ 0.65
CTNND1O60716 GIMAP3P-201ENST00000495150 836 ntBASIC19.13■□□□□ 0.65
CTNND1O60716 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CTNND1O60716 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.13■□□□□ 0.65
CTNND1O60716 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.13■□□□□ 0.65
CTNND1O60716 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTNND1O60716 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 SRD5A3P1-201ENST00000603021 949 ntBASIC19.13■□□□□ 0.65
CTNND1O60716 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.13■□□□□ 0.65
CTNND1O60716 SLC7A15P-201ENST00000424028 1363 ntBASIC19.13■□□□□ 0.65
CTNND1O60716 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CTNND1O60716 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CTNND1O60716 AL023806.1-201ENST00000603994 1649 ntBASIC19.13■□□□□ 0.65
CTNND1O60716 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CTNND1O60716 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.13■□□□□ 0.65
CTNND1O60716 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTNND1O60716 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNND1O60716 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CTNND1O60716 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTNND1O60716 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.12■□□□□ 0.65
CTNND1O60716 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 GGT4P-201ENST00000623672 1708 ntBASIC19.12■□□□□ 0.65
CTNND1O60716 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNND1O60716 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms