Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF3IP2O43734 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAF3IP2O43734 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF3IP2O43734 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF3IP2O43734 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF3IP2O43734 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 WASH6P-202ENST00000359512 1437 ntBASIC14.69□□□□□ -0.06
TRAF3IP2O43734 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 KRT18P34-201ENST00000488218 1270 ntBASIC14.69□□□□□ -0.06
TRAF3IP2O43734 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 AC091812.2-201ENST00000619081 385 ntBASIC14.69□□□□□ -0.06
TRAF3IP2O43734 AL161645.1-201ENST00000622716 1255 ntBASIC14.69□□□□□ -0.06
TRAF3IP2O43734 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF3IP2O43734 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 MCCD1P2-201ENST00000423228 335 ntBASIC14.68□□□□□ -0.06
TRAF3IP2O43734 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 AC004832.2-201ENST00000426397 482 ntBASIC14.68□□□□□ -0.06
TRAF3IP2O43734 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 DOC2GP-204ENST00000639052 2548 ntBASIC14.68□□□□□ -0.06
TRAF3IP2O43734 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 FLJ16779-201ENST00000612722 7638 ntBASIC14.68□□□□□ -0.06
TRAF3IP2O43734 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TRAF3IP2O43734 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms