Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.87■□□□□ 0.93
ABCC4O15439 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.87■□□□□ 0.93
ABCC4O15439 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.87■□□□□ 0.93
ABCC4O15439 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.87■□□□□ 0.93
ABCC4O15439 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.87■□□□□ 0.93
ABCC4O15439 AC027307.2-201ENST00000591252 911 ntBASIC20.87■□□□□ 0.93
ABCC4O15439 AC073389.1-201ENST00000595595 795 ntBASIC20.87■□□□□ 0.93
ABCC4O15439 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.87■□□□□ 0.93
ABCC4O15439 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
ABCC4O15439 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ABCC4O15439 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ABCC4O15439 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ABCC4O15439 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.87■□□□□ 0.93
ABCC4O15439 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ABCC4O15439 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ABCC4O15439 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ABCC4O15439 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ABCC4O15439 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.87■□□□□ 0.93
ABCC4O15439 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.87■□□□□ 0.93
ABCC4O15439 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
ABCC4O15439 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ABCC4O15439 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.86■□□□□ 0.93
ABCC4O15439 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.86■□□□□ 0.93
ABCC4O15439 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.86■□□□□ 0.93
ABCC4O15439 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ABCC4O15439 AL138918.1-201ENST00000568306 659 ntBASIC20.86■□□□□ 0.93
ABCC4O15439 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCC4O15439 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.86■□□□□ 0.93
ABCC4O15439 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.86■□□□□ 0.93
ABCC4O15439 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.86■□□□□ 0.93
ABCC4O15439 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ABCC4O15439 PCDH8P1-201ENST00000428983 2773 ntBASIC20.86■□□□□ 0.93
ABCC4O15439 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
ABCC4O15439 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
ABCC4O15439 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 MIR346-201ENST00000362234 95 ntBASIC20.85■□□□□ 0.93
ABCC4O15439 AC092580.3-201ENST00000430932 139 ntBASIC20.85■□□□□ 0.93
ABCC4O15439 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ABCC4O15439 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.85■□□□□ 0.93
ABCC4O15439 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 AC097493.3-201ENST00000509725 367 ntBASIC20.85■□□□□ 0.93
ABCC4O15439 PRYP6-201ENST00000514804 343 ntBASIC20.85■□□□□ 0.93
ABCC4O15439 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.85■□□□□ 0.93
ABCC4O15439 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 AL035252.4-201ENST00000624174 288 ntBASIC20.85■□□□□ 0.93
ABCC4O15439 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ABCC4O15439 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ABCC4O15439 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.85■□□□□ 0.93
ABCC4O15439 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.85■□□□□ 0.93
ABCC4O15439 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ABCC4O15439 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.85■□□□□ 0.93
ABCC4O15439 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms