Protein–RNA interactions for Protein: G3V325

ATP5J2-PTCD1, ATP5J2-PTCD1 readthrough, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5J2-PTCD1G3V325 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP5J2-PTCD1G3V325 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP5J2-PTCD1G3V325 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 AP005018.1-201ENST00000525475 301 ntBASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 AC024267.1-201ENST00000582320 895 ntBASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 AC004840.1-201ENST00000636359 365 ntBASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP5J2-PTCD1G3V325 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP5J2-PTCD1G3V325 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms