Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 DUX4L27-201ENST00000554796 1261 ntBASIC15.03■□□□□ -0
NPIPA3F8WFD2 SPCS2P1-201ENST00000561636 679 ntBASIC15.03■□□□□ -0
NPIPA3F8WFD2 LINC01225-203ENST00000563550 1244 ntBASIC15.03■□□□□ -0
NPIPA3F8WFD2 AC005498.2-205ENST00000593218 784 ntBASIC15.03■□□□□ -0
NPIPA3F8WFD2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA3F8WFD2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA3F8WFD2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA3F8WFD2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA3F8WFD2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA3F8WFD2 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.02■□□□□ -0
NPIPA3F8WFD2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA3F8WFD2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA3F8WFD2 TUBB3P1-201ENST00000405796 1332 ntBASIC15.02■□□□□ -0
NPIPA3F8WFD2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA3F8WFD2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 MIR3909-201ENST00000579518 119 ntBASIC15.02■□□□□ -0
NPIPA3F8WFD2 AC027307.2-201ENST00000591252 911 ntBASIC15.02■□□□□ -0
NPIPA3F8WFD2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA3F8WFD2 AP001059.3-201ENST00000619053 235 ntBASIC15.02■□□□□ -0
NPIPA3F8WFD2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA3F8WFD2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 AC006277.1-201ENST00000624348 1610 ntBASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA3F8WFD2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 NKILA-202ENST00000614771 2598 ntBASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 AL645728.1-201ENST00000366221 2101 ntBASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 GPS2P2-201ENST00000430745 888 ntBASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 AC093214.1-201ENST00000511688 1107 ntBASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 SLC25A39P2-201ENST00000537614 270 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms