Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 AC236430.1-201ENST00000402231 743 ntBASIC24.1■■□□□ 1.45
HFM1A2PYH4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 AC190387.1-201ENST00000551683 408 ntBASIC24.1■■□□□ 1.45
HFM1A2PYH4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 PCDHA14-201ENST00000506751 2298 ntBASIC24.09■■□□□ 1.45
HFM1A2PYH4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 AL691432.1-201ENST00000596308 1422 ntBASIC24.09■■□□□ 1.45
HFM1A2PYH4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 RN7SL618P-201ENST00000477850 296 ntBASIC24.09■■□□□ 1.45
HFM1A2PYH4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HFM1A2PYH4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC24.09■■□□□ 1.45
HFM1A2PYH4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC24.08■■□□□ 1.45
HFM1A2PYH4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HFM1A2PYH4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HFM1A2PYH4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HFM1A2PYH4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC24.08■■□□□ 1.45
HFM1A2PYH4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
HFM1A2PYH4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 SERBP1P3-201ENST00000459980 809 ntBASIC24.08■■□□□ 1.44
HFM1A2PYH4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
HFM1A2PYH4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
HFM1A2PYH4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
HFM1A2PYH4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
HFM1A2PYH4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 AP001282.1-201ENST00000531301 1499 ntBASIC24.07■■□□□ 1.44
HFM1A2PYH4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 AC244107.1-201ENST00000442033 332 ntBASIC24.07■■□□□ 1.44
HFM1A2PYH4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 SERBP1P5-201ENST00000510079 1181 ntBASIC24.07■■□□□ 1.44
HFM1A2PYH4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 AL033527.5-202ENST00000641632 1098 ntBASIC24.07■■□□□ 1.44
HFM1A2PYH4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HFM1A2PYH4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
HFM1A2PYH4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC24.06■■□□□ 1.44
HFM1A2PYH4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC24.06■■□□□ 1.44
HFM1A2PYH4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC24.06■■□□□ 1.44
HFM1A2PYH4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC24.06■■□□□ 1.44
HFM1A2PYH4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC24.06■■□□□ 1.44
HFM1A2PYH4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
HFM1A2PYH4 SPDYE18-201ENST00000510091 1050 ntBASIC24.06■■□□□ 1.44
HFM1A2PYH4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms