Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 KRT8P12-202ENST00000472924 1397 ntBASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AL023806.1-201ENST00000603994 1649 ntBASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC187A0A096LP49 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 SDHAP3-202ENST00000515467 728 ntBASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 AP002490.2-201ENST00000524791 560 ntBASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 WASH4P-201ENST00000564273 1246 ntBASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 AC132938.2-201ENST00000579188 680 ntBASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 AL591163.1-201ENST00000641757 987 ntBASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC187A0A096LP49 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 TPRX2P-201ENST00000535362 881 ntBASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC187A0A096LP49 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC187A0A096LP49 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms