Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC012640.2-201ENST00000561606 901 ntBASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 AL596257.1-201ENST00000641463 2694 ntBASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 AC006538.1-201ENST00000567905 1585 ntBASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 AL365203.3-201ENST00000609742 2057 ntBASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGB3Q9Y5G1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 AC136632.2-201ENST00000512891 861 ntBASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 AC013467.2-201ENST00000605472 835 ntBASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 AL139011.1-202ENST00000642063 584 ntBASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 AC105917.1-201ENST00000506637 2539 ntBASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGB3Q9Y5G1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 AC006504.4-201ENST00000592118 1568 ntBASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 AC104109.2-201ENST00000602919 1418 ntBASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 RNA5SP415-201ENST00000517246 115 ntBASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 AC034105.1-201ENST00000563488 319 ntBASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 AL356488.2-201ENST00000602755 427 ntBASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB3Q9Y5G1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB3Q9Y5G1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms