Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 MIR662-201ENST00000384847 95 ntBASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 AC005332.3-201ENST00000589904 676 ntBASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ERGIC3Q9Y282 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 CICP24-201ENST00000605464 2705 ntBASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 AC003669.1-201ENST00000334569 611 ntBASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ERGIC3Q9Y282 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 AC125634.1-201ENST00000438758 1403 ntBASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERGIC3Q9Y282 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms