Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 AC073592.4-201ENST00000623827 446 ntBASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB4Q9UN71 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB4Q9UN71 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGB4Q9UN71 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PCDHGB4Q9UN71 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGB4Q9UN71 AL391256.1-201ENST00000443260 1855 ntBASIC16.08■□□□□ 0.17
PCDHGB4Q9UN71 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 AL645728.1-201ENST00000366221 2101 ntBASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 AC004817.3-201ENST00000602957 2129 ntBASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 AP005117.1-201ENST00000584346 1413 ntBASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB4Q9UN71 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 PRYP5-201ENST00000451909 266 ntBASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 AC138894.3-201ENST00000603787 634 ntBASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGB4Q9UN71 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms